The Best Online Payroll Software

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Paychex Flex Screenshot

Paychex Flex

★★★★★
★★★★★
(3)
Paychex Flex is an online payroll software with an integrated solution for payroll, benefits administration, workforce management, and HR services. The software provides built-in safeguards, payroll tax calculations, a free mobile app, and reporting.
Client OS
iOS, Android, Web
Deployment
Cloud Hosted
Gusto Screenshot

Gusto

★★★★★
★★★★★
(4)
Gusto is an online payroll and HR administration platform tailored primarily for startups and small businesses. The software simplifies payroll processing, benefits administration, and offers features like charitable giving, financial wellness tools, and a wallet for employee financial management.
Price Range
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Starting Price
$40/month
Deployment
Cloud Hosted
SurePayroll Screenshot
SurePayroll is a cloud-based payroll service designed for small businesses. It offers features like tax calculation and filing, payroll processing, direct deposits, and integrations with various accounting and time-tracking tools. Key highlights include its user-friendly interface, mobile app functionality, and a comprehensive suite of HR tools, making it a versatile choice for small business payroll needs.
Price Range
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Starting Price
$24/month
Client OS
Web
Deployment
Cloud Hosted
QuickBooks Online Screenshot

QuickBooks Online

★★★★★
★★★★★
(80)
QuickBooks Online is the most popular financial software on the market. This cloud-based accounting solution enables tracking of sales and expenses, generating estimates, customer management, and seamless collaboration with external accountants.
Price Range
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Starting Price
$35/month
Client OS
Web
Deployment
Cloud Hosted
ADP Payroll Solutions Screenshot

ADP Payroll Solutions

★★★★★
★★★★★
(2)
ADP Payroll Solutions provides better experience with HR and payroll in a modern, easy to use, all-in-one platform. Trusted by more than 900,000 clients, ADP has unmatched global experience in HR, payroll and compliance. From simple tools to full-service outsourcing, ADP offers a variety of solutions in accordance with your company size including: [[toc]] @youtube Automated payroll; Payroll tax filing; Deductions management; Employee schedule management; Compliance management solutions; Employee
Client OS
iOS, Android, Web
Deployment
Cloud Hosted
Rippling Screenshot

Rippling

★★★★★
★★★★★
(3)
Rippling is an all-in-one HR platform providing online payroll, benefits, and human resource management. The software helps unify employee data whether a business has 1 employee to 1,000 employees. It can also manage the IT involved with managing employees with app provisioning, single sign-on, passwords, and computer access.
Price Range
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Starting Price
$8/employee/month
Client OS
iOS, Android, Web
Deployment
Cloud Hosted
OnPay Solutions Screenshot

OnPay Solutions

OnPay Solutions is an accounts payable automation and accounts receivable automation software that helps eliminate the paper processes. OnPay will digitize your office through strong invoicing and supplier payment capabilities. Easy-to-implement cloud-based payment system that allows companies to automate electronic accounts payable Compatible with all Accounting or ERP systems — even if check is the only payment type available in AP system ; Streamlines all payment types into one, easy-to-use,
Client OS
Web
Deployment
Cloud Hosted
Patriot Software Screenshot

Patriot Software

★★★★★
★★★★★
(1)
Patriot Software is a cloud-hosted 1099 and accounting software that handles basic payroll. Its accounting module supports vendor payments, invoicing, payment recording, and the tracking of bank cash deposits and withdrawals.
Price Range
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Starting Price
$20/month
Client OS
Windows
Deployment
Cloud Hosted
Namely Screenshot

Namely

★★★★★
★★★★★
(3)
The Namely HR platform offers everything mid-sized businesses need to handle payroll, benefits, time tracking, and talent management. This software covers essential HR needs and compliance requirements in one place. Recruit, onboard, and manage employees; ensure they get paid; and offer perks to attract and retain them. With an open API, companies can pull all the employee data into the Namely platform, which means everything from an Applicant Tracking System to the 401(k) is in one place.
Price Range
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   $     $     $     $     $   
Starting Price
$9/employee/month
Client OS
Web
Deployment
Cloud Hosted
UZIO Screenshot

UZIO

UZIO is HRIS software designed for businesses of all sizes, managing HR, payroll, benefits, and time & attendance. It streamlines HR processes, enhances efficiency, and digitizes employee management. UZIO partners with brokers, PEOs, CPAs, and ASOs to offer a 360-degree HR and payroll solution for their clients.
Starting Price
$4.50/employee/month
Client OS
Windows, Android, Web
Deployment
Cloud Hosted
BambooHR Screenshot

BambooHR

★★★★★
★★★★★
(1)
BambooHR is a software with human resource management capabilities, especially in applicant tracking, employee onboarding, and performance management. It integrates with systems like NetSuite, Payroll Harmony, and TimeWorksPlus. BambooHR also provides a mobile hiring app, time tracking, and payroll features.
Price Range
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Starting Price
$99/month
Client OS
iOS, Android, Web
Deployment
Cloud Hosted
Wagepoint Screenshot

Wagepoint

Wagepoint is an onine payroll software for small businesses to pay employees and independent contractors. Wagepoint also helps keep your business compliant with any payroll regulations in your jurisdiction. Wagepoint helps streamline the payroll obligation and compliance work to make your accounting process easier. Direct deposit; Wage calculation; Federal, State, and Local Taxes; 1099s, W2s, and W3s; Wage detail reports; New hire reporting; Additional deductions; Contractor payments; Additional
Price Range
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   $     $     $     $     $   
Starting Price
$20/month
Client OS
Web
Deployment
Cloud Hosted
Wave Screenshot

Wave

★★★★★
★★★★★
(5)
The Wave app is a highly popular accounting solution among freelancers and small businesses. It’s a free cloud-hosted software that allows you to track income and expenses, perform bank reconciliation, capture and organize receipts, and create custom invoices.
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
Free
Client OS
iOS, Android, Web
Deployment
Cloud Hosted
TriNet HR Software Screenshot

TriNet HR Software

★★★★★
★★★★★
(2)
TriNet, formerly Zenefits, is an HR software. The platform allows businesses to manage the entire employee lifecycle, from recruiting to offboarding, and provides tools for HR compliance, people operations, and performance management. Key features include payroll, benefits enrollment, and employee onboarding. TriNet provides employees access to premium benefits typically available to larger organizations.
Client OS
Windows, macOS, iOS, Android
Deployment
Cloud Hosted
Paycor Screenshot

Paycor

★★★★★
★★★★★
(3)
Paycor is a human capital management (HCM) software that provides cloud-based onboarding, HR, payroll, and timekeeping software capabilities. Paycor’s HCM platform modernizes every aspect of managing the people of a business, from the initial recruitment, retainment, and paying them via payroll. Paycor’s HCM software makes managing day-to-day operations easier via applicant tracking, reducing administrative tasks for open enrollment and benefits, to keeping an eye on payroll costs. It has modules offering custom reports, on-demand HR features, and timekeeping utilities.
Client OS
Web
Deployment
Cloud Hosted
Square Payroll Screenshot

Square Payroll

Square Payroll is an online software for small businesses. This all-in-one solution works with every type of business to track employee hours, calulate salaries, and cover benefits. And you can also run payroll from your device with the Square Payroll App. Pay your team from anywhere and never miss payroll again. Pay employees and contractors; Pay salaried and hourly employees; Offer health and other benefits; Give employees online accounts; Track employee hours; Import timecards and tips; Pay
Starting Price
$34/month
Client OS
Web
Deployment
Cloud Hosted
Payroll4Free Screenshot

Payroll4Free

★★★★★
★★★★★
(4)
Payroll4Free.com is a free payroll software for small businesses to manage payroll for up to 10 employees at no cost. Key features include automated tax calculations and filings, the ability to pay W2 and 1099 contractors through direct deposit or physical checks, and detailed reporting functionalities. The system also offers an employee portal to access pay information and vacation time-tracking capabilities.
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
$12.50/month
Client OS
Web
Deployment
Cloud Hosted
Xero Screenshot

Xero

★★★★★
★★★★★
(3)
A contender against QuickBooks Online, Xero is a popular solution for its user-friendly interface, affordability, and unlimited users per subscription. It’s a cloud-based, double-entry accounting software that offers bank reconciliation, financial reporting, and basic invoicing and billing.
Price Range
   $     $     $     $     $   
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Starting Price
$15/month
Client OS
Web
Deployment
Cloud Hosted
UKG Pro Screenshot

UKG Pro

★★★★★
★★★★★
(2)
UKG Pro, the combination of UltiPro Ultimate Software and Kronos, unites all aspects of HR, payroll, and talent management into a complete human capital management functionality. The cloud-based product suite is designed to simplify work people to every day, and identify employees at risk to leave the company. Advanced services include payment and check printing.
Client OS
iOS, Android, Web
Deployment
Cloud Hosted
CenterPoint Payroll Screenshot

CenterPoint Payroll

★★★★★
★★★★★
(6)
CenterPoint Payroll offers customizable payroll processing, time tracking, tax management, and detailed reporting. Deployed on-premises or in the cloud, it also supports multiple pay rates and integrates with different accounting systems.
Price Range
   $     $     $     $     $   
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Client OS
Windows, Web
Deployment
Cloud or On-Premises

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Buyer’s Guide

Every business has to deal with some degree of payroll. From check printing to tax filing, payroll software is designed to streamline operations by calculating employee salaries, wages, bonuses, tax withholding, and deductions while also running payroll on weekly, biweekly, or other schedules.

What is Online Payroll Software?

Running payroll can be a labor-intensive process, which is why online payroll software was developed to streamline wage-related workflow. Like on-premise solutions, this cloud-based payroll software functionality includes calculating compensation, withholding taxes, and much more as securely and accurately as possible.

Online payroll solutions may also include elements of human resource (HR) software, such as time and attendance tracking, in order to accurately perform wage calculation. Yet one of the main roles of full-service payroll software is to facilitate the transition from batch check printing to direct deposit payment. Included or optional add-on modules even cover general accounting tasks necessary for balancing payroll and other financial services.

Paychex Flex Software
Use the Paychex Flex dashboard to review payroll updates.
  • General ledger integration: Summarize your financial transactions and balance payroll with accounts payable (AP) and accounts receivable (AR)
  • Salary and wage calculation: Calculate employee paychecks based on hours worked, overtime rates, or custom salary requirements
  • Deductions management: Withhold funds from paychecks fortaxes, benefits, wage garnishments, health insurance, 401(k) or retirement contributions, and other reasons while remaining compliant with local and federal regulations
  • Check printing and direct deposit: Batch print physical employee paychecks for distribution instead of writing individual payroll checks; automatically deposit funds to employee bank accounts
  • Pay stubs: Create copies of physical and digital paycheck stubs for tax filing records, each stub provides detailed payroll information such as salary, wage earned based on hours worked, deductions, tax withholdings, etc.
  • Overtime management: Calculate alternate pay rates based on the accrual of overtime hours
  • Electronic tax filing: Digitally submit direct deposit payroll returns, including W-2 and 1099 tax forms, without paper-based documentation while meeting compliance standards
  • Time and attendance tracking: Report employee time worked, paid time off (PTO), and absences for wage calculation purposes
  • Employee self-service portal: Create customized employee portals accessible via desktop browsers or mobile apps; allow employees to check on their own paycheck data such as withholding settings, vacation accrued, tax forms, or edit account information
  • Certified payroll: Verify wage payments and confirm compensation is in accordance with prevailing wage standards based on local, federal, or international regulations

Best Online Payroll Software Benefits

Online payroll software offers many benefits to businesses looking to adapt how they run payroll:

Faster Payroll Services

Of course, the first benefit of online payroll software is the ability to perform payroll services anytime, anywhere. Just log in, check your totals, and grant approvals. Financing and HR departments can even run payroll automatically through cloud-based systems. Just select paydays in advance or plan for weekly or biweekly payroll based on what payment plan your company prefers. Same-day direct deposit also means more money in the bank for your company, helping to keep accounts balanced as long as possible.

Online payroll software can also benefit your company by consolidating all historical data into one accessible location. Check was past employees earned and how workers’ compensation was handled to get a better understanding of acceptable offers for new hires. No more digging through old pay stubs and adjusting for inflation: just let the software automate the work.

SurePayroll Software
SurePayroll lets you review different payroll reports.

Self-Service Options for Employees

Self-service portals give employees the tools they need to do anything from submitting time off requests to managing their retirement and 401(k) contributions. Intuitive mobile app designs ensure ease of use even for employees who are less than tech-savvy. This is useful for small businesses who cannot have a dedicated financing or HR department in charge of running payroll. Online payroll services can be accessed by any approved employee from anywhere.

Did an employee vacation overlap two pay periods? Employees can go into their account to mark their PTO themselves. If they make a mistake scheduling their time off, user-friendly software makes it easy to enter adjustments after the fact and ensure payroll is accurate in time for payday. And the workers themselves can use mobile apps to review their payroll data for accuracy or change their preferences for employee benefits at any time even if working remotely from home.

Expand a Global Enterprise

Another benefit of online payroll software is the ability to expand your services as your company grows. If you plan on opening new locations around the world, having an online payroll software can help you keep up with the more complex payroll processes or tax payments required by those local government entities. Or you can calculate the exchange rate between different currencies to correctly pay international employees.

Online payroll software is capable of keeping you up-to-date on the latest minimum wage laws in areas you operate. You can also access periodic reporting on government regulations to ensure continued compliance with wage laws. Automatically download the latest versions of tax forms, like the W-2 or 1099, to supply your employees at tax time. These forms are also useful when filing payroll taxes or undergoing IRS audits by creating a digital papertrail of all your employee pay stubs.

There are a number of local, state, and federal laws your business must consider when processing payroll. Each of these laws are used to calculate how much tax is withheld and are affected by the number of employees your company has, their full or part time status, and a few other factors. Save time running complicated payroll with easy to use software. Along with organizing payments, automatically generated payroll reports can provide regular updates on how much is withheld and how employee benefits are being compensated.

Online Payroll Software Pricing

Control costs at your company by finding affordable payroll software to fit your needs. Cloud-based payroll software can lead to more cost savings from all your future payroll runs. Most online software as a service (SaaS) products range from $5 per month per user up to $45 per month. Others are based on the total number of employees covered by your payroll.

A few solutions may offer a perpetual license instead for a one-time fee, though training, updates, and maintenance may cost extra. Whether you’re a small business owner or accountant for a global corporation, you can find the best payroll software packages priced for your budget.

The switch to online payroll software has led to a lot of useful benefits for businesses looking to streamline payroll services. As described above, running payroll online with direct deposit is one of the biggest payroll trends worldwide. How it works is simple: employees provide a bank routing number to your HR or accounting department. When payday rolls around, the funds allocated to them are directly transferred to that account.

New hires across every industry are starting to demand direct deposit since it streamlines compensation. Understandably, no one wants to wait for batch printing or physical mail to get paid. While it’s useful to keep your payroll options open by still offering paper paychecks, it doesn’t hurt to also have direct payments ready to go. Keep your company up-to-date with cloud-based direct deposit payroll as soon as they start onboarding.