Is QuickBooks for Nonprofits? An Accounting Software FAQ for NPOs

Last Updated: January 24th, 2023
Researched and Written by: Lexi Wood

Nonprofit organizations require a lot of work to meet funding compliance all while operating on a tight budget made up of donations. Spending time manually performing accounting processes can take away valuable time and money from the mission. Intuit QuickBooks accounting software products are among the most popular for automating accounting processes for NPOs all at a low cost.

Is QuickBooks right for your NPO? Learn more about what this accounting software has to offer:

What is QuickBooks Accounting Software?

To start, the majority of QuickBooks accounting products include modules for:

  • Accounts Payable (AP) and Accounts Receivable (AR)
  • General ledger with balance sheet
  • Invoicing
  • Financial reports and analytics

These features can be used for both nonprofit and for-profit entities. Additionally, specific QuickBooks products offer tools for business management, payroll, sales tracking, and much more necessary to streamlining day-to-day tasks.

What Custom Features Does QuickBooks Have for NPOs?

On a superficial level, NPOs using QuickBooks software can mark their account as nonprofit during setup to change the terminology to fit, i.e. reporting features will change “customers” to “donors”. Beyond these changes, QuickBooks products are fully customizable to best suit your needs all in real-time.

Of course, NPOs have significant operating differences from for-profit businesses. Nonprofits looking to automate should seek QuickBooks accounting software with very specific functionality, primarily:

  • Fund accounting
  • Donation management
  • Grant management

All of these tools are designed to handle funding, whether from individual donations or acquired through government grants. For instance, donation tracking allows for your NPO to record both one-time pledges or recurring payments to accurately report when and where all donated funding came from.

QuickBooks Enterprise Software
Get clear insight into your NPO’s financial situation with QuickBooks Enterprise’s nonprofit edition.

Which QuickBooks Products are Best for NPOs?

QuickBooks has multiple accounting software solutions which are suitable for nonprofits, 4 of the most popular are:

  • QuickBooks Enterprise Nonprofit
  • QuickBooks Online
  • QuickBooks Pro
  • QuickBooks Premier

While some of these products are not specifically designed for NPOs, they can still be used by organizations in need of basic financial management. Learn more about each now:

QuickBooks Enterprise

QuickBooks Enterprise
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Inventory Dashboard
Company Snapshot
Payroll
Income Tracker
Credit Card Entry
Company Preference Pane
Batch Invoices
What We Like
Over 120 standard reports
Includes payroll and employee management
What We Don’t Like
More expensive than other QuickBooks options
Overview
Price Range: $$$
Starting Price: $199/month
Client OS: Windows
Deployment: Cloud or On-Premises

QuickBooks Enterprise by Intuit offers the most comprehensive business management solution for growing businesses with up to 30 simultaneous users. Enterprise Solutions allows you to customize over 120 built-in reports and template forms to look the way you want. There is a specific version of QuickBooks Enterprise designed for nonprofits to easily store and access data from thousands of donors and vendors. Included with this edition is a nonprofit chart of accounts, PO workflow approvals, and customized payment receipts.

Enterprise Solutions integrates with a broad number of compatible business applications to provide additional solutions for your nonprofit business. Streamline all the critical operations of your work, including finances, inventory, sales, purchasing and payroll into one cohesive system.

QuickBooks Online

QuickBooks Online
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Sales Dashboard
Find an Accountant
Track Mileleage
Mobile Cash Flow
Bank Reconciliation
Dashboard
Mobile Dashboard
Customers
Mobile Shortcuts
Create Invoice
Sales Vendors
Bill Pay
Banking
Expense Dashboard
Payroll Dashboard
What We Like
Easy to use
Multiple 3rd party applications
Affordable for NPOs
What We Don’t Like
Few industry-specific features
User cap
Lacks key reports
Overview
Price Range: $
Starting Price: $30/month (50% discount available)
Client OS: Web
Deployment: Cloud Hosted

QuickBooks Online (QBO) is the most flexible accounting software solutions to link multiple users and locations to their business finances-anytime, anywhere. It has the accounting functionality of QuickBooks desktop software yet is accessible through the Cloud from anywhere with a high-speed Internet connection.

There are multiple versions of this software to best suit your current needs:

  • QuickBooks Online Simple Start: Ideal for new startups
  • QuickBooks Online Essentials: Intended for small businesses
  • QuickBooks Online Plus: Suited for project-based businesses
  • QuickBooks Online Advanced: Offers the highest level of support

QuickBooks Pro

QuickBooks Pro
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Send Email Purchase Order
QuickBooks Recurring Billing
QuickBooks Invoicing
Chart of Accounts List
What We Like
Includes business management functionality
Cloud or on-premise implementation
Popular with small businesses/organizations
What We Don’t Like
Inconsistent pricing
Limited customization opportunities
Overview
Price Range: $
Client OS: Windows
Deployment: Cloud or On-Premises

QuickBooks is the undisputed leader in accounting software for small businesses with over 2 million users worldwide. Intuit’s QuickBooks Pro to bring complete financial management capabilities to small nonprofits who do not understand technical accounting jargon and just want to handle their finances. Available on-premise or cloud-hosted, this is more than an accounting software: it’s a comprehensive business management solution.

QuickBooks Pro integrates with 15 business solutions to streamline operations:

  • Microsoft Word and Excel
  • TurboTax
  • Online banking and bill payment
  • And much more!

While QB Pro will work, it was not designed with nonprofits in mind, and therefore has for-profit language which may not be comparable for NPOs.

QuickBooks Premier

QuickBooks Premier
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Invoice
Home Page
Inventory Valuation
Check Writing
Reports: Balance Sheet, Profit and Loss
Reports: Profit and Loss Budget vs. Actual
Chart of Accounts
What We Like
Industry-specific features for NPOs
Built on QuickBooks Pro
Includes IRS Form 990 tools
What We Don’t Like
Limited flexibility in reporting
Requires on-premise deployment
Overview
Price Range: $
Starting Price: $499.95 (perpetual license)
Client OS: Windows
Deployment: On-Premises

QuickBooks Premier builds on the foundation of QuickBooks Pro while giving you additional industry specific features in specially designed Editions. The QuickBooks Premier Nonprofit Edition will allow you or your accountant to easily prepare the IRS Form 990. QuickBooks Premier Nonprofit Edition will organize all your finances according to IRS requirements. The system will simply require you to transfer totals arrived at automatically by QuickBooks onto your 990 form without any manual calculation.

Managing multiple programs can be difficult for any nonprofit. With limited funds, you can see why most NPOs choose to create separate budgets for each program. QuickBooks Premier includes tools to build budgets which allow you to compare the actual amounts against what is used. This functionality is accomplished in the report center.

What are the Benefits of Using QuickBooks for Nonprofits?

Modern nonprofits have the ability to automate administrative processes so staff and volunteers can focus on fulfilling their mission. As described above, QuickBooks offers some of the most popular and robust accounting software products available for any business, capable of performing a wide range of tasks to reduce time spent on manual data entry and report analysis.

While all QuickBooks products can be used by nonprofits, Premier and Enterprise offer dedicated nonprofit editions. For instance, QuickBooks Premier can create IRS Form 990, the Statement of Functional Expenses, to fully identify your internal expenses for presentation to your board, major donors, and, of course, the Internal Revenue Service. This data can be gathered by Online, though it will not be able to instantly generate end-of-year donation statements without some manual intervention.

QuickBooks Premier Chart of Accounts
QuickBooks Premier Nonprofit Edition includes a chart of accounts to review all your finances.

Does QuickBooks Integrate with NPO Software?

Since QuickBooks is primarily focused on accounting features, you may need additional tools to optimize other aspects of your day-to-day operations, such as volunteer management or fundraising event planning. Most QuickBooks products are able to seamlessly integrate with other types of software, especially those created by Intuit QuickBooks, such as their solutions for payroll management and employee time tracking.

There are limitations when it comes to third-party software and mobile apps. Fortunately, many software vendors, such as Salesforce and MailChimp, have made integrations possible between their solutions and QuickBooks. Some have limited compatibility, such as the ability to export data into Microsoft Excel. Other popular integrations include:

  • Amazon Business
  • Paypal
  • Quicken
  • Shopify
  • Square
  • Stripe
  • TurboTax

There are hundreds of NPO-specific integrations available as well. QuickBooks Online in particular can integrate with specific nonprofit software like Fundly, DonorPath, and Kindful in order to track donations, manage volunteers, and consolidate financial data into custom reports.

Is there a QuickBooks Discount for Nonprofits?

QuickBooks accounting software pricing plans are as low as $25 per month, though with discounts first-time subscribers can start as low as $12.50 per per user for the first few months of service. Other plans featuring additional features can range from $50 per month up to $180 per month. However, there are no special discounts just for NPOs, with the exception of plans donated through TechSoup.

How Much Does QuickBooks Cost?

As mentioned above, each version of QuickBooks has different per user pricing plans with add-ons available for an additional fee. Single-user, on-premise solutions can cost hundreds or thousands to implement. Since there are no contracts for monthly subscriptions, users can upgrade or cancel at any time based on changing budgetary concerns. There is an additional, one-time fee for customized setup with a QuickBooks Live Bookkeeper, though these customer support sessions are not required.

QuickBooks Online Nonprofit Accounting Software Dashboard
The nonprofit accounting dashboard offered by QuickBooks Online lets you manage your budget in one location.

What are Nonprofit Accounting Software Alternatives to QuickBooks?

While QuickBooks is highly popular, it is not always the right fit for NPOs. For instance, it might not integrate with an existing legacy system at your organization. Or it could simply be too expensive for the size of your NPO. Fortunately, there are several QuickBooks alternatives for nonprofits wanting to try different software to better suit their needs or budget. A few of the top options are:

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Sage Intacct
Sage Intacct Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
$8,580/year (Add $2,880 per extra user)
Client OS
Web
Deployment
Cloud Hosted
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(9)
MIP Fund Accounting
MIP Fund Accounting Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Client OS
Windows
Deployment
Cloud or On-Premises
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(2)
Aplos Fund Accounting
Aplos Fund Accounting Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
$59/month
Client OS
Web
Deployment
Cloud Hosted
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★★★★★
(3)
Xero
Xero Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
$13/month
Client OS
Web
Deployment
Cloud Hosted
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(5)
Zoho Books
Zoho Books Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
$9/month
Client OS
Web
Deployment
Cloud Hosted
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(2)
NonProfit+
NonProfit+ Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Starting Price
$585/month
Client OS
Web
Deployment
Cloud Hosted
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(5)
Wave
Wave Screenshot
Price Range
   $     $     $     $     $   
   $     $     $     $     $   
Client OS
iOS, Android, Web
Deployment
Cloud Hosted

Of these alternatives, some offer special pricing for NPOs in order to reduce operating costs. Others are even free for small organizations or those with limited funding.

Need help finding an affordable nonprofit accounting software alternative to QuickBooks? Software Connect can help with recommendations for your NPO.

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